Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | RHPLAN_RS33490 | Not Available | Positive | 7180915 - 7181808 | 33838.4 |
| alpha/beta hydrolase | RHPLAN_RS33495 | Not Available | Negative | 7181860 - 7182723 | 31132.0 |
| alpha/beta fold hydrolase | RHPLAN_RS33500 | Not Available | Positive | 7182845 - 7183666 | 29859.7 |
| llm class flavin-dependent oxidoreductase | RHPLAN_RS33505 | Not Available | Positive | 7183678 - 7184862 | 44066.7 |
| hypothetical protein | RHPLAN_RS39930 | Not Available | Positive | 7185063 - 7185269 | 7580.06 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS33510 | Not Available | Negative | 7185432 - 7186460 | 36906.9 |
| glutathione s-transferase family protein | RHPLAN_RS33515 | Not Available | Negative | 7186460 - 7187158 | 26585.9 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS33520 | Not Available | Positive | 7187421 - 7188488 | 37728.6 |
| tripartite tricarboxylate transporter permease | RHPLAN_RS33525 | Not Available | Positive | 7188547 - 7190631 | 73950.5 |
| murein l,d-transpeptidase | RHPLAN_RS33530 | Not Available | Positive | 7190866 - 7192812 | 70557.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.