Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | RHPLAN_RS40310 | Not Available | Positive | 7132157 - 7132804 | 23425.3 |
| efflux rnd transporter periplasmic adaptor subunit | RHPLAN_RS33295 | Not Available | Positive | 7132801 - 7134003 | 41751.9 |
| macb family efflux pump subunit | RHPLAN_RS33300 | Not Available | Positive | 7134000 - 7135946 | 68684.7 |
| alpha/beta hydrolase | RHPLAN_RS33305 | Not Available | Positive | 7136057 - 7136995 | 33611.5 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS33310 | Not Available | Positive | 7137166 - 7138146 | 34565.7 |
| voc family protein | RHPLAN_RS33315 | Not Available | Positive | 7138209 - 7138640 | 15657.0 |
| rida family protein | RHPLAN_RS33320 | Not Available | Negative | 7138694 - 7139980 | 46344.9 |
| abc transporter atp-binding protein | RHPLAN_RS33325 | Not Available | Positive | 7140227 - 7140988 | 28300.5 |
| abc transporter permease | RHPLAN_RS33330 | Not Available | Positive | 7140988 - 7141839 | 30974.0 |
| abc transporter substrate-binding protein | RHPLAN_RS33335 | Not Available | Positive | 7141860 - 7142855 | 35965.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.