Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygcg family protein | RHPLAN_RS33190 | Not Available | Negative | 7110732 - 7111517 | 27234.7 |
| lema family protein | RHPLAN_RS33195 | Not Available | Negative | 7111548 - 7112147 | 21956.2 |
| voc family protein | RHPLAN_RS33200 | Not Available | Positive | 7112314 - 7112850 | 19826.0 |
| tripartite tricarboxylate transporter substrate-binding protein | RHPLAN_RS33205 | Not Available | Positive | 7112905 - 7113873 | 33624.7 |
| hypothetical protein | RHPLAN_RS33210 | Not Available | Positive | 7114074 - 7114514 | 14772.2 |
| duf983 domain-containing protein | RHPLAN_RS33215 | Not Available | Positive | 7114681 - 7115118 | 15741.6 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS33220 | Not Available | Negative | 7115128 - 7116084 | 33370.5 |
| sdr family nad(p)-dependent oxidoreductase | RHPLAN_RS33225 | Not Available | Negative | 7116143 - 7116937 | 27672.5 |
| glutathione s-transferase family protein | RHPLAN_RS33230 | Not Available | Negative | 7117064 - 7117825 | 28481.4 |
| s1c family serine protease | RHPLAN_RS33235 | Not Available | Negative | 7117936 - 7118952 | 35423.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.