Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | RHPLAN_RS33140 | Not Available | Negative | 7100061 - 7100960 | 34416.8 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS33145 | Not Available | Negative | 7100986 - 7101984 | 35468.1 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS33150 | Not Available | Positive | 7102167 - 7103138 | 34121.2 |
| amidohydrolase | RHPLAN_RS33155 | Not Available | Negative | 7103141 - 7104076 | 33776.5 |
| aquaporin z | RHPLAN_RS33160 | Not Available | Negative | 7104217 - 7104942 | 24276.9 |
| bifunctional sugar phosphate isomerase/epimerase/4-hydroxyphenylpyruvate dioxygenase family protein | RHPLAN_RS33165 | Not Available | Negative | 7105050 - 7106921 | 68491.4 |
| alpha/beta fold hydrolase | RHPLAN_RS33170 | Not Available | Positive | 7107044 - 7107832 | 28606.5 |
| llm class flavin-dependent oxidoreductase | RHPLAN_RS33175 | Not Available | Positive | 7107829 - 7108992 | 43631.2 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS33180 | Not Available | Positive | 7109123 - 7110103 | 34212.6 |
| tpm domain-containing protein | RHPLAN_RS33185 | Not Available | Negative | 7110121 - 7110732 | 22132.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.