Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6460 domain-containing protein | RHPLAN_RS33085 | Not Available | Positive | 7089488 - 7089748 | 9660.2 |
| is630 family transposase | RHPLAN_RS38770 | Not Available | Positive | 7089941 - 7090889 | 35963.7 |
| abc transporter permease subunit | RHPLAN_RS33100 | Not Available | Negative | 7090896 - 7091708 | 28757.8 |
| abc transporter permease | RHPLAN_RS33105 | Not Available | Negative | 7091708 - 7092661 | 35039.9 |
| abc transporter atp-binding protein | RHPLAN_RS33110 | Not Available | Negative | 7092658 - 7093839 | 42900.0 |
| response regulator transcription factor | RHPLAN_RS33115 | Not Available | Negative | 7093915 - 7094520 | 22205.2 |
| glycerol kinase glpk | RHPLAN_RS33120 | Not Available | Negative | 7094648 - 7096141 | 53141.6 |
| glycerol-3-phosphate dehydrogenase | RHPLAN_RS33125 | Not Available | Negative | 7096145 - 7097632 | 55450.6 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS33130 | Not Available | Positive | 7097735 - 7098796 | 38389.3 |
| aldo/keto reductase | RHPLAN_RS33135 | Not Available | Negative | 7098842 - 7099834 | 34963.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.