Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS33035 | Not Available | Positive | 7078398 - 7078943 | 20565.5 |
| Trna-his | Not Available | Not Available | Positive | 7079180 - 7079256 | Not Available |
| phasin | RHPLAN_RS33045 | Not Available | Negative | 7079524 - 7080006 | 17564.6 |
| phasin family protein | RHPLAN_RS33050 | Not Available | Negative | 7080248 - 7080637 | 13962.4 |
| pas domain-containing sensor histidine kinase | RHPLAN_RS33055 | Not Available | Positive | 7080851 - 7083943 | 108842.0 |
| alpha/beta fold hydrolase | RHPLAN_RS33060 | Not Available | Positive | 7084068 - 7084919 | 31087.5 |
| duf1194 domain-containing protein | RHPLAN_RS33065 | Not Available | Positive | 7085045 - 7085794 | 26884.4 |
| coa transferase subunit a | RHPLAN_RS33070 | Not Available | Positive | 7085904 - 7086611 | 25332.0 |
| coa transferase subunit b | RHPLAN_RS33075 | Not Available | Positive | 7086624 - 7087289 | 23542.5 |
| asma family protein | RHPLAN_RS33080 | Not Available | Positive | 7087428 - 7089365 | 68143.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.