Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinRHPLAN_RS32835Not AvailableNegative7030939 - 70312089454.2
bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase putaRHPLAN_RS32840Not AvailableNegative7031391 - 7034498110491.0
abc transporter substrate-binding proteinRHPLAN_RS32845Not AvailablePositive7034765 - 703580537474.2
abc transporter atp-binding proteinRHPLAN_RS32850Not AvailablePositive7035844 - 703662628941.2
abc transporter permeaseRHPLAN_RS32855Not AvailablePositive7036623 - 703739627950.0
lysr family transcriptional regulatorRHPLAN_RS32860Not AvailableNegative7037537 - 703843931906.3
glucan abc transporter atp-binding protein/ permeaseRHPLAN_RS32865Not AvailablePositive7038810 - 704062766224.6
alkaline phosphatase family proteinRHPLAN_RS32870Not AvailableNegative7040731 - 704186741035.3
d-2-hydroxyacid dehydrogenaseRHPLAN_RS32875Not AvailablePositive7042035 - 704296734058.7
amidohydrolase family proteinRHPLAN_RS32880Not AvailablePositive7043082 - 704417640216.3

Displaying genes 6711 – 6720 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.