Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | RHPLAN_RS32785 | Not Available | Negative | 7021505 - 7022842 | 49982.1 |
| glutathione s-transferase family protein | RHPLAN_RS32790 | Not Available | Positive | 7022985 - 7023791 | 30961.4 |
| xaa-pro peptidase family protein | RHPLAN_RS32795 | Not Available | Positive | 7023990 - 7025294 | 48981.8 |
| hypothetical protein | RHPLAN_RS32800 | Not Available | Positive | 7025312 - 7025611 | 10400.6 |
| substrate-binding domain-containing protein | RHPLAN_RS32805 | Not Available | Positive | 7025753 - 7026448 | 24373.6 |
| esterase-like activity of phytase family protein | RHPLAN_RS32810 | Not Available | Positive | 7026539 - 7027840 | 46955.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | RHPLAN_RS32815 | Not Available | Positive | 7027967 - 7028908 | 33470.7 |
| hypothetical protein | RHPLAN_RS32820 | Not Available | Negative | 7028936 - 7029505 | 20159.8 |
| yqaa family protein | RHPLAN_RS32825 | Not Available | Negative | 7029727 - 7030326 | 21887.5 |
| phosphoribosyl-atp diphosphatase | RHPLAN_RS32830 | Not Available | Negative | 7030409 - 7030801 | 14595.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.