Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
branched-chain amino acid abc transporter permeaseRHPLAN_RS32735Not AvailableNegative7011048 - 701202234862.1
branched-chain amino acid abc transporter permeaseRHPLAN_RS32740Not AvailableNegative7012040 - 701295732510.5
abc transporter substrate-binding proteinRHPLAN_RS32745Not AvailableNegative7013351 - 701452642517.8
benzoate-coa ligase family proteinRHPLAN_RS32750Not AvailableNegative7014566 - 701615558107.5
cobalamin-independent methionine synthase ii family proteinRHPLAN_RS32760Not AvailablePositive7016600 - 701777243746.6
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS32765Not AvailablePositive7017824 - 701880734705.1
hypothetical proteinRHPLAN_RS39915Not AvailableNegative7018817 - 70189876202.35
maoc family dehydrataseRHPLAN_RS32770Not AvailableNegative7019069 - 701954517445.0
mate family efflux transporterRHPLAN_RS32775Not AvailableNegative7019562 - 702094146939.9
marr family winged helix-turn-helix transcriptional regulatorRHPLAN_RS32780Not AvailablePositive7021064 - 702150115896.4

Displaying genes 6691 – 6700 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.