Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | RHPLAN_RS32635 | Not Available | Negative | 6985614 - 6986396 | 27560.5 |
| abc transporter atp-binding protein | RHPLAN_RS32640 | Not Available | Negative | 6986393 - 6987172 | 27859.8 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS32645 | Not Available | Negative | 6987175 - 6988134 | 33922.4 |
| abc transporter substrate-binding protein | RHPLAN_RS32650 | Not Available | Negative | 6988169 - 6989176 | 36834.2 |
| dihydroxy-acid dehydratase | RHPLAN_RS32655 | Not Available | Positive | 6989563 - 6991251 | 59934.8 |
| uroporphyrinogen decarboxylase family protein | RHPLAN_RS32660 | Not Available | Negative | 6991372 - 6992412 | 37900.6 |
| fad-binding and (fe-s)-binding domain-containing protein | RHPLAN_RS32665 | Not Available | Negative | 6992447 - 6995365 | 105892.0 |
| alanine--glyoxylate aminotransferase family protein | RHPLAN_RS32670 | Not Available | Positive | 6995531 - 6996739 | 43542.5 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS32675 | Not Available | Positive | 6996858 - 6997823 | 33788.2 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS32680 | Not Available | Positive | 6997857 - 6998828 | 33748.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.