Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | RHPLAN_RS32540 | Not Available | Positive | 6967227 - 6967964 | 26576.5 |
| abc transporter atp-binding protein | RHPLAN_RS32545 | Not Available | Positive | 6967954 - 6968685 | 26267.3 |
| voc family protein | RHPLAN_RS32550 | Not Available | Negative | 6968854 - 6969327 | 17011.5 |
| amino acid abc transporter substrate-binding protein | RHPLAN_RS32555 | Not Available | Negative | 6969437 - 6970708 | 45923.5 |
| voc family protein | RHPLAN_RS32560 | Not Available | Positive | 6970907 - 6971374 | 17688.9 |
| cyclase family protein | RHPLAN_RS32565 | Not Available | Positive | 6971506 - 6972279 | 28463.0 |
| c-type cytochrome | RHPLAN_RS32570 | Not Available | Negative | 6972346 - 6972927 | 21584.7 |
| sorbosone dehydrogenase family protein | RHPLAN_RS32575 | Not Available | Negative | 6972988 - 6974283 | 46430.3 |
| pyrroloquinoline quinone biosynthesis protein pqqe | RHPLAN_RS32580 | Not Available | Negative | 6974403 - 6975485 | 39694.4 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | RHPLAN_RS32585 | Not Available | Negative | 6975487 - 6975774 | 10322.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.