Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RHPLAN_RS32490 | Not Available | Positive | 6957451 - 6958698 | 45264.8 |
| branched-chain amino acid abc transporter permease | RHPLAN_RS32495 | Not Available | Positive | 6958775 - 6959647 | 30718.1 |
| branched-chain amino acid abc transporter permease | RHPLAN_RS32500 | Not Available | Positive | 6959644 - 6960642 | 35434.3 |
| abc transporter atp-binding protein | RHPLAN_RS32505 | Not Available | Positive | 6960639 - 6961376 | 27071.9 |
| abc transporter atp-binding protein | RHPLAN_RS32510 | Not Available | Positive | 6961366 - 6962088 | 25582.2 |
| amidohydrolase family protein | RHPLAN_RS32515 | Not Available | Positive | 6962113 - 6963177 | 38736.4 |
| fad binding domain-containing protein | RHPLAN_RS32520 | Not Available | Negative | 6963356 - 6964561 | 44164.4 |
| hypothetical protein | RHPLAN_RS32525 | Not Available | Positive | 6964633 - 6965076 | 16779.8 |
| branched-chain amino acid abc transporter permease | RHPLAN_RS32530 | Not Available | Positive | 6965286 - 6966149 | 30940.9 |
| branched-chain amino acid abc transporter permease | RHPLAN_RS32535 | Not Available | Positive | 6966160 - 6967227 | 37380.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.