Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | RHPLAN_RS32440 | Not Available | Positive | 6948147 - 6949124 | 35724.5 |
| maleylacetoacetate isomerase | RHPLAN_RS32445 | Not Available | Negative | 6949276 - 6949926 | 23885.9 |
| nad(p)-dependent oxidoreductase | RHPLAN_RS32450 | Not Available | Negative | 6949951 - 6950835 | 31057.9 |
| heme-binding protein | RHPLAN_RS32455 | Not Available | Negative | 6950876 - 6951406 | 17664.5 |
| nad(p)-dependent oxidoreductase | RHPLAN_RS32460 | Not Available | Positive | 6951578 - 6952486 | 32339.9 |
| branched-chain amino acid abc transporter permease | RHPLAN_RS32465 | Not Available | Positive | 6952607 - 6953467 | 30162.9 |
| branched-chain amino acid abc transporter permease | RHPLAN_RS32470 | Not Available | Positive | 6953474 - 6954484 | 36298.3 |
| abc transporter substrate-binding protein | RHPLAN_RS32475 | Not Available | Positive | 6954519 - 6955775 | 45943.3 |
| abc transporter atp-binding protein | RHPLAN_RS32480 | Not Available | Positive | 6955837 - 6956613 | 28332.7 |
| abc transporter atp-binding protein | RHPLAN_RS32485 | Not Available | Positive | 6956617 - 6957318 | 25927.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.