Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xanthine dehydrogenase family protein subunit mRHPLAN_RS32390Not AvailablePositive6937114 - 693796229210.4
(2fe-2s)-binding proteinRHPLAN_RS32395Not AvailablePositive6937959 - 693844717292.8
xanthine dehydrogenase family protein molybdopterin-binding subunitRHPLAN_RS32400Not AvailablePositive6938680 - 694107685276.8
cyclase family proteinRHPLAN_RS32405Not AvailablePositive6941177 - 694213035088.7
histidinol dehydrogenaseRHPLAN_RS32410Not AvailablePositive6942398 - 694370547173.8
mapeg family proteinRHPLAN_RS32415Not AvailablePositive6943744 - 694414514821.7
sdr family nad(p)-dependent oxidoreductaseRHPLAN_RS32420Not AvailablePositive6944156 - 694492926989.7
transporter substrate-binding domain-containing proteinRHPLAN_RS32425Not AvailablePositive6944939 - 694574829793.1
d-glycerate dehydrogenaseRHPLAN_RS32430Not AvailableNegative6945916 - 694690535649.4
llm class flavin-dependent oxidoreductaseRHPLAN_RS32435Not AvailableNegative6946944 - 694804441008.4

Displaying genes 6621 – 6630 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.