Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prc-barrel domain-containing protein | RHPLAN_RS03190 | Not Available | Positive | 686558 - 687097 | 18747.2 |
| ba14k family protein | RHPLAN_RS03195 | Not Available | Positive | 687268 - 687738 | 16445.0 |
| glsb/yeaq/ymge family stress response membrane protein | RHPLAN_RS03200 | Not Available | Positive | 688005 - 688298 | 10152.0 |
| hypothetical protein | RHPLAN_RS03205 | Not Available | Positive | 688372 - 688851 | 16803.1 |
| hypothetical protein | RHPLAN_RS03210 | Not Available | Negative | 688974 - 689261 | 10816.6 |
| hypothetical protein | RHPLAN_RS03215 | Not Available | Negative | 689601 - 689870 | 10185.6 |
| crp/fnr family transcriptional regulator | RHPLAN_RS03220 | Not Available | Negative | 689954 - 690664 | 26320.3 |
| cold-shock protein | RHPLAN_RS03225 | Not Available | Positive | 690853 - 691056 | 7196.6 |
| class i mannose-6-phosphate isomerase | RHPLAN_RS03230 | Not Available | Positive | 691406 - 692278 | 30811.9 |
| glycosyltransferase family 4 protein | RHPLAN_RS03235 | Not Available | Positive | 692275 - 694692 | 88214.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.