Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
llm class flavin-dependent oxidoreductaseRHPLAN_RS32140Not AvailableNegative6885043 - 688619442038.7
alpha/beta hydrolaseRHPLAN_RS32145Not AvailableNegative6886197 - 688707232592.6
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS32150Not AvailableNegative6887127 - 688810133970.4
lysr family transcriptional regulatorRHPLAN_RS32155Not AvailablePositive6888179 - 688911434606.4
rida family proteinRHPLAN_RS32160Not AvailableNegative6889235 - 689053946999.5
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS32165Not AvailablePositive6890683 - 689167535116.4
hypothetical proteinRHPLAN_RS32170Not AvailableNegative6891875 - 689228514912.1
lysr family transcriptional regulatorRHPLAN_RS32175Not AvailableNegative6892547 - 689350035146.0
sulfite exporter taue/safe family proteinRHPLAN_RS32180Not AvailablePositive6893608 - 689444428086.4
thiamine pyrophosphate-requiring proteinRHPLAN_RS32185Not AvailableNegative6894548 - 689631463729.4

Displaying genes 6571 – 6580 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.