Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | RHPLAN_RS32030 | Not Available | Negative | 6864547 - 6865185 | 23543.4 |
| voc family protein | RHPLAN_RS32035 | Not Available | Negative | 6865288 - 6865713 | 15397.4 |
| fumarylacetoacetate hydrolase family protein | RHPLAN_RS32040 | Not Available | Positive | 6865859 - 6866782 | 32754.3 |
| voc family protein | RHPLAN_RS32045 | Not Available | Positive | 6866869 - 6867759 | 33128.5 |
| voc family protein | RHPLAN_RS32050 | Not Available | Positive | 6867977 - 6868354 | 13851.6 |
| nad(p)/fad-dependent oxidoreductase | RHPLAN_RS32055 | Not Available | Positive | 6868369 - 6869586 | 45819.6 |
| lysr family transcriptional regulator | RHPLAN_RS32060 | Not Available | Negative | 6869591 - 6870592 | 37112.9 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS32065 | Not Available | Positive | 6870725 - 6871702 | 33556.9 |
| phnd/ssua/transferrin family substrate-binding protein | RHPLAN_RS32070 | Not Available | Positive | 6871707 - 6872678 | 37042.7 |
| amidohydrolase family protein | RHPLAN_RS32075 | Not Available | Negative | 6872705 - 6874162 | 53105.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.