Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | RHPLAN_RS31980 | Not Available | Positive | 6854391 - 6855353 | 35687.9 |
| hypothetical protein | RHPLAN_RS31985 | Not Available | Positive | 6855350 - 6856567 | 45130.9 |
| abc transporter substrate-binding protein | RHPLAN_RS31990 | Not Available | Negative | 6856605 - 6857867 | 45751.7 |
| hypothetical protein | RHPLAN_RS31995 | Not Available | Positive | 6857899 - 6858078 | 5957.44 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS32000 | Not Available | Negative | 6858178 - 6859146 | 33786.9 |
| rraa family protein | RHPLAN_RS32005 | Not Available | Negative | 6859215 - 6859901 | 24544.4 |
| sdr family oxidoreductase | RHPLAN_RS32010 | Not Available | Negative | 6859901 - 6860686 | 27229.2 |
| aspartate dehydrogenase | RHPLAN_RS32015 | Not Available | Negative | 6860694 - 6861554 | 29293.0 |
| molybdopterin cofactor-binding domain-containing protein | RHPLAN_RS32020 | Not Available | Negative | 6861626 - 6863857 | 80035.7 |
| (2fe-2s)-binding protein | RHPLAN_RS32025 | Not Available | Negative | 6863859 - 6864317 | 16520.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.