Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rieske 2fe-2s domain-containing protein | RHPLAN_RS31930 | Not Available | Negative | 6841122 - 6842405 | 48725.9 |
| rida family protein | RHPLAN_RS31935 | Not Available | Negative | 6842479 - 6843825 | 49326.3 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS31940 | Not Available | Negative | 6843846 - 6844787 | 33347.2 |
| gdp-l-fucose synthase | RHPLAN_RS31945 | Not Available | Positive | 6844986 - 6845939 | 34846.1 |
| collagen-like protein | RHPLAN_RS31950 | Not Available | Positive | 6846071 - 6846901 | 25996.2 |
| hypothetical protein | RHPLAN_RS39910 | Not Available | Positive | 6847046 - 6847483 | 15472.9 |
| amidohydrolase | RHPLAN_RS31960 | Not Available | Positive | 6847538 - 6849346 | 65126.3 |
| 5'-3' exonuclease | RHPLAN_RS31965 | Not Available | Negative | 6850143 - 6851027 | 32262.0 |
| fusc family protein | RHPLAN_RS31970 | Not Available | Positive | 6851055 - 6852896 | 65585.0 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS31975 | Not Available | Negative | 6853334 - 6854317 | 34745.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.