Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphotransferase chpt | RHPLAN_RS31880 | Not Available | Negative | 6830751 - 6831392 | 22254.3 |
| yhs domain-containing (seleno)protein | RHPLAN_RS31885 | Not Available | Negative | 6831466 - 6831894 | 15666.3 |
| duf1134 domain-containing protein | RHPLAN_RS31890 | Not Available | Positive | 6832095 - 6832697 | 20878.2 |
| hypothetical protein | RHPLAN_RS31895 | Not Available | Positive | 6832884 - 6834152 | 46661.7 |
| duf2927 domain-containing protein | RHPLAN_RS31900 | Not Available | Positive | 6834252 - 6835085 | 31390.4 |
| ldh family oxidoreductase | RHPLAN_RS31905 | Not Available | Negative | 6835221 - 6836285 | 37151.9 |
| alpha/beta hydrolase | RHPLAN_RS31910 | Not Available | Negative | 6836291 - 6837181 | 32466.7 |
| metal-sensitive transcriptional regulator | RHPLAN_RS31915 | Not Available | Negative | 6837430 - 6837705 | 10259.4 |
| heavy metal translocating p-type atpase | RHPLAN_RS31920 | Not Available | Positive | 6837757 - 6840114 | 82681.5 |
| sdr family nad(p)-dependent oxidoreductase | RHPLAN_RS31925 | Not Available | Negative | 6840270 - 6841097 | 29476.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.