Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis protein flha | RHPLAN_RS31780 | Not Available | Positive | 6809112 - 6811244 | 75550.8 |
| hypothetical protein | RHPLAN_RS31785 | Not Available | Positive | 6811592 - 6811804 | 7507.29 |
| flagellar export protein flij | RHPLAN_RS31790 | Not Available | Negative | 6811926 - 6812339 | 16015.0 |
| flagellar protein export atpase flii | RHPLAN_RS31795 | Not Available | Negative | 6812511 - 6813845 | 47427.6 |
| response regulator transcription factor ctra | RHPLAN_RS31800 | Not Available | Positive | 6814218 - 6814919 | 26075.6 |
| lysr substrate-binding domain-containing protein | RHPLAN_RS31805 | Not Available | Negative | 6815003 - 6815932 | 33466.1 |
| mbl fold metallo-hydrolase | RHPLAN_RS31810 | Not Available | Positive | 6816030 - 6816923 | 32960.7 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS31815 | Not Available | Positive | 6816935 - 6817885 | 33196.6 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS31820 | Not Available | Positive | 6817908 - 6818873 | 33832.1 |
| 2og-fe(ii) oxygenase | RHPLAN_RS31825 | Not Available | Negative | 6818883 - 6819629 | 27536.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.