Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | RHPLAN_RS31730 | Not Available | Positive | 6797992 - 6798585 | 21725.3 |
| rida family protein | RHPLAN_RS31735 | Not Available | Negative | 6798772 - 6799182 | 15195.5 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS31740 | Not Available | Positive | 6799292 - 6800275 | 34186.2 |
| abc transporter atp-binding protein | RHPLAN_RS31745 | Not Available | Negative | 6800279 - 6801793 | 54592.2 |
| cysteine hydrolase family protein | RHPLAN_RS31750 | Not Available | Negative | 6801790 - 6802473 | 24840.0 |
| abc transporter permease | RHPLAN_RS31755 | Not Available | Negative | 6802494 - 6803420 | 32098.8 |
| abc transporter permease | RHPLAN_RS31760 | Not Available | Negative | 6803426 - 6804481 | 36344.6 |
| bmp family abc transporter substrate-binding protein | RHPLAN_RS31765 | Not Available | Negative | 6804500 - 6805606 | 39652.4 |
| hypothetical protein | RHPLAN_RS31770 | Not Available | Positive | 6805948 - 6807198 | 45613.6 |
| hypothetical protein | RHPLAN_RS31775 | Not Available | Positive | 6807457 - 6808233 | 29124.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.