Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpa family transcriptional regulator | RHPLAN_RS38130 | Not Available | Negative | 677530 - 677766 | 9086.66 |
| fad-binding protein | RHPLAN_RS03165 | Not Available | Positive | 678072 - 678491 | 14868.9 |
| hypothetical protein | RHPLAN_RS38970 | Not Available | Negative | 679373 - 679690 | 11889.2 |
| hypothetical protein | RHPLAN_RS38975 | Not Available | Negative | 680093 - 680293 | 7408.78 |
| hypothetical protein | RHPLAN_RS38980 | Not Available | Positive | 680794 - 681063 | 9688.75 |
| co-chaperone groes | RHPLAN_RS03170 | Not Available | Positive | 681918 - 682232 | 11425.0 |
| chaperonin groel | RHPLAN_RS03175 | Not Available | Positive | 682311 - 683942 | 57915.9 |
| hypothetical protein | RHPLAN_RS38985 | Not Available | Positive | 684122 - 684370 | 8934.9 |
| hypothetical protein | RHPLAN_RS03180 | Not Available | Negative | 685127 - 685441 | 11572.8 |
| sensor histidine kinase | RHPLAN_RS03185 | Not Available | Negative | 685441 - 686397 | 34627.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.