Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS31630 | Not Available | Positive | 6777857 - 6778909 | 36686.0 |
| Trna-met | Not Available | Not Available | Positive | 6779116 - 6779192 | Not Available |
| hypothetical protein | RHPLAN_RS31640 | Not Available | Negative | 6779313 - 6779666 | 11624.7 |
| class i sam-dependent methyltransferase | RHPLAN_RS31645 | Not Available | Negative | 6779748 - 6780395 | 23761.8 |
| trna 2-thiouridine(34) synthase mnma | RHPLAN_RS31650 | Not Available | Negative | 6780436 - 6781584 | 40958.8 |
| flagellar hook-length control protein flik | RHPLAN_RS31655 | Not Available | Positive | 6781862 - 6783472 | 54235.3 |
| flagellar hook assembly protein flgd | RHPLAN_RS31660 | Not Available | Positive | 6783493 - 6784179 | 23963.7 |
| duf1153 domain-containing protein | RHPLAN_RS31665 | Not Available | Positive | 6784418 - 6784693 | 10291.4 |
| hypothetical protein | RHPLAN_RS31670 | Not Available | Positive | 6784887 - 6785240 | 12485.8 |
| hypothetical protein | RHPLAN_RS31675 | Not Available | Positive | 6785415 - 6785813 | 14226.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.