Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rieske 2fe-2s domain-containing protein | RHPLAN_RS31580 | Not Available | Positive | 6769565 - 6769930 | 13633.1 |
| amidohydrolase family protein | RHPLAN_RS31585 | Not Available | Positive | 6769943 - 6771160 | 47243.8 |
| hypothetical protein | RHPLAN_RS40305 | Not Available | Positive | 6771551 - 6771727 | 6876.15 |
| fic family protein | RHPLAN_RS31595 | Not Available | Positive | 6771733 - 6772389 | 23765.2 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS31600 | Not Available | Negative | 6772483 - 6773481 | 35165.9 |
| hypothetical protein | RHPLAN_RS31605 | Not Available | Positive | 6773733 - 6773933 | 7165.6 |
| hypothetical protein | RHPLAN_RS31610 | Not Available | Positive | 6774271 - 6774474 | 6898.29 |
| voc family protein | RHPLAN_RS31615 | Not Available | Positive | 6774662 - 6775471 | 29007.9 |
| heterodisulfide reductase-related iron-sulfur binding cluster | RHPLAN_RS31620 | Not Available | Negative | 6775486 - 6776529 | 38391.0 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS31625 | Not Available | Negative | 6776561 - 6777523 | 34087.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.