Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdate abc transporter substrate-binding protein | RHPLAN_RS31540 | Not Available | Positive | 6758257 - 6759009 | 26444.1 |
| molybdate abc transporter substrate-binding protein | RHPLAN_RS31545 | Not Available | Positive | 6759022 - 6759783 | 25539.3 |
| extracellular solute-binding protein | RHPLAN_RS31550 | Not Available | Positive | 6759797 - 6760552 | 26140.6 |
| extracellular solute-binding protein | RHPLAN_RS31555 | Not Available | Positive | 6760567 - 6761325 | 26109.0 |
| hlyd family type i secretion periplasmic adaptor subunit | RHPLAN_RS31560 | Not Available | Negative | 6761406 - 6762854 | 52800.5 |
| type i secretion system permease/atpase | RHPLAN_RS31565 | Not Available | Negative | 6762841 - 6764982 | 78807.3 |
| calcium-binding protein | RHPLAN_RS31570 | Not Available | Negative | 6765008 - 6767704 | 88520.0 |
| hypothetical protein | RHPLAN_RS40680 | Not Available | Positive | 6767726 - 6768061 | 11943.8 |
| is5/is1182 family transposase | RHPLAN_RS40300 | Not Available | Positive | 6768151 - 6768303 | 5872.15 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS31575 | Not Available | Negative | 6768369 - 6769337 | 34568.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.