Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS31490 | Not Available | Negative | 6747820 - 6748200 | 13914.8 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | RHPLAN_RS31495 | Not Available | Negative | 6748203 - 6749231 | 36402.4 |
| prc-barrel domain-containing protein | RHPLAN_RS31500 | Not Available | Positive | 6749736 - 6750347 | 20525.3 |
| n-acetylmuramoyl-l-alanine amidase | RHPLAN_RS31505 | Not Available | Positive | 6750560 - 6751402 | 30758.6 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 6751436 - 6751840 | Not Available |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS31515 | Not Available | Positive | 6752226 - 6753200 | 33979.9 |
| atp-binding cassette domain-containing protein | RHPLAN_RS31520 | Not Available | Positive | 6753222 - 6754001 | 28394.4 |
| abc transporter permease/substrate-binding protein | RHPLAN_RS31525 | Not Available | Positive | 6753998 - 6755551 | 55490.2 |
| l-histidine n(alpha)-methyltransferase | RHPLAN_RS31530 | Not Available | Negative | 6755746 - 6756774 | 37465.6 |
| ergothioneine biosynthesis protein egtb | RHPLAN_RS31535 | Not Available | Negative | 6756806 - 6758041 | 45888.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.