Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramate--l-alanine ligaseRHPLAN_RS31440Not AvailableNegative6734539 - 673594250201.4
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseRHPLAN_RS31445Not AvailableNegative6736027 - 673714838546.4
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS31450Not AvailableNegative6737228 - 673822634766.1
hypothetical proteinRHPLAN_RS31455Not AvailableNegative6738330 - 673905227008.3
putative lipid ii flippase ftswRHPLAN_RS31460Not AvailableNegative6739169 - 674032041335.0
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseRHPLAN_RS31465Not AvailableNegative6740414 - 674181749465.1
phospho-n-acetylmuramoyl-pentapeptide- transferaseRHPLAN_RS31470Not AvailableNegative6741954 - 674303938585.1
udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligaseRHPLAN_RS31475Not AvailableNegative6743044 - 674448649398.6
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseRHPLAN_RS31480Not AvailableNegative6744483 - 674593750453.7
penicillin-binding protein 2RHPLAN_RS31485Not AvailableNegative6746033 - 674781465057.8

Displaying genes 6431 – 6440 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.