Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ankyrin repeat domain-containing protein | RHPLAN_RS31390 | Not Available | Negative | 6722674 - 6723582 | 32060.6 |
| abc transporter substrate-binding protein | RHPLAN_RS31395 | Not Available | Positive | 6723787 - 6724707 | 32472.9 |
| outer membrane protein assembly factor bamd | RHPLAN_RS31400 | Not Available | Negative | 6724711 - 6725559 | 31888.6 |
| udp-3-o-acyl-n-acetylglucosamine deacetylase | RHPLAN_RS31405 | Not Available | Negative | 6725764 - 6726735 | 34391.1 |
| cell division protein ftsz | RHPLAN_RS31410 | Not Available | Negative | 6727209 - 6728942 | 61378.0 |
| cell division protein ftsa | RHPLAN_RS31415 | Not Available | Negative | 6729055 - 6730341 | 45471.9 |
| cell division protein ftsq/divib | RHPLAN_RS31420 | Not Available | Negative | 6730368 - 6731342 | 35091.4 |
| d-alanine--d-alanine ligase | RHPLAN_RS31425 | Not Available | Negative | 6731309 - 6732229 | 33177.9 |
| fad-dependent monooxygenase | RHPLAN_RS31430 | Not Available | Negative | 6732226 - 6733464 | 45957.0 |
| udp-n-acetylmuramate dehydrogenase | RHPLAN_RS31435 | Not Available | Negative | 6733622 - 6734539 | 32302.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.