Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | RHPLAN_RS31290 | Not Available | Negative | 6698697 - 6699287 | 22017.1 |
| 50s ribosomal protein l11 methyltransferase | RHPLAN_RS31295 | Not Available | Positive | 6699429 - 6700355 | 33292.0 |
| hypothetical protein | RHPLAN_RS31300 | Not Available | Negative | 6700755 - 6700994 | 9046.88 |
| aminopeptidase p family protein | RHPLAN_RS31305 | Not Available | Positive | 6701290 - 6703122 | 66043.7 |
| multidrug effflux mfs transporter | RHPLAN_RS31310 | Not Available | Positive | 6703122 - 6704348 | 42424.7 |
| abc transporter substrate-binding protein | RHPLAN_RS31315 | Not Available | Positive | 6704409 - 6705455 | 38930.6 |
| nad-dependent dna ligase liga | RHPLAN_RS31320 | Not Available | Negative | 6705585 - 6707702 | 78266.2 |
| pqq-binding-like beta-propeller repeat protein | RHPLAN_RS31325 | Not Available | Positive | 6707873 - 6708982 | 39311.5 |
| hypothetical protein | RHPLAN_RS31330 | Not Available | Negative | 6708945 - 6709403 | 16815.2 |
| alpha-hydroxy acid oxidase | RHPLAN_RS31335 | Not Available | Positive | 6709576 - 6710832 | 45858.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.