Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinRHPLAN_RS31240Not AvailableNegative6690483 - 669104620308.2
amino acid abc transporter substrate-binding proteinRHPLAN_RS31245Not AvailablePositive6691219 - 669246045038.4
nad(p)-dependent alcohol dehydrogenaseRHPLAN_RS31250Not AvailablePositive6692476 - 669358239099.2
universal stress proteinRHPLAN_RS31255Not AvailablePositive6693683 - 669412915567.7
heme-binding proteinRHPLAN_RS31260Not AvailablePositive6694225 - 669472516903.5
l,d-transpeptidaseRHPLAN_RS31265Not AvailablePositive6694921 - 669560125195.6
duf350 domain-containing proteinRHPLAN_RS31270Not AvailablePositive6695754 - 669615813823.2
hypothetical proteinRHPLAN_RS31275Not AvailablePositive6696164 - 66964068271.54
glutathionylspermidine synthase family proteinRHPLAN_RS31280Not AvailablePositive6696422 - 669757342942.8
tripartite tricarboxylate transporter substrate-binding proteinRHPLAN_RS31285Not AvailablePositive6697703 - 669867734544.2

Displaying genes 6391 – 6400 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.