Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS38955 | Not Available | Positive | 668072 - 669034 | 36619.2 |
| hypothetical protein | RHPLAN_RS38960 | Not Available | Positive | 669106 - 669933 | 31063.5 |
| hypothetical protein | RHPLAN_RS38965 | Not Available | Positive | 670195 - 670566 | 14301.8 |
| plasmid partitioning protein repb c-terminal domain-containing protein | RHPLAN_RS03125 | Not Available | Negative | 671440 - 672339 | 33624.1 |
| plasmid partitioning protein repb c-terminal domain-containing protein | RHPLAN_RS03130 | Not Available | Negative | 672341 - 673237 | 33643.9 |
| recombinase family protein | RHPLAN_RS03135 | Not Available | Negative | 673234 - 674802 | 59097.9 |
| hypothetical protein | RHPLAN_RS03140 | Not Available | Positive | 674928 - 675290 | 13114.8 |
| hypothetical protein | RHPLAN_RS40405 | Not Available | Positive | 675798 - 676031 | 8531.25 |
| is5/is1182 family transposase | RHPLAN_RS38120 | Not Available | Negative | 675994 - 676221 | 8429.06 |
| duf2924 domain-containing protein | RHPLAN_RS40410 | Not Available | Negative | 676347 - 677312 | 36163.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.