Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | RHPLAN_RS31085 | Not Available | Positive | 6655406 - 6656341 | 34188.0 |
| ubid family decarboxylase | RHPLAN_RS31090 | Not Available | Positive | 6656457 - 6657983 | 57068.7 |
| trap transporter substrate-binding protein | RHPLAN_RS31095 | Not Available | Negative | 6658079 - 6659095 | 36104.5 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS31100 | Not Available | Negative | 6659193 - 6660170 | 34750.9 |
| duf1330 domain-containing protein | RHPLAN_RS31105 | Not Available | Negative | 6660530 - 6660934 | 13989.8 |
| voc family protein | RHPLAN_RS31110 | Not Available | Negative | 6661178 - 6661594 | 14770.7 |
| hypothetical protein | RHPLAN_RS39895 | Not Available | Positive | 6661648 - 6662583 | 33406.6 |
| abc transporter substrate-binding protein | RHPLAN_RS31120 | Not Available | Positive | 6662598 - 6663599 | 35035.9 |
| abc transporter substrate-binding protein | RHPLAN_RS31125 | Not Available | Positive | 6663596 - 6664558 | 33802.2 |
| cysteine hydrolase family protein | RHPLAN_RS31130 | Not Available | Negative | 6664677 - 6665297 | 23489.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.