Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease modulator hflc | RHPLAN_RS30935 | Not Available | Negative | 6622600 - 6623520 | 34393.0 |
| ftsh protease activity modulator hflk | RHPLAN_RS30940 | Not Available | Negative | 6623517 - 6624647 | 41122.1 |
| dihydrofolate reductase | RHPLAN_RS30945 | Not Available | Negative | 6624789 - 6625316 | 18483.4 |
| thymidylate synthase | RHPLAN_RS30950 | Not Available | Negative | 6625313 - 6626107 | 30257.4 |
| tripartite tricarboxylate transporter substrate binding protein bugd | RHPLAN_RS30955 | Not Available | Negative | 6626296 - 6627282 | 34146.2 |
| tripartite tricarboxylate transporter permease | RHPLAN_RS30960 | Not Available | Negative | 6627418 - 6628920 | 52262.0 |
| tripartite tricarboxylate transporter tctb family protein | RHPLAN_RS30965 | Not Available | Negative | 6628936 - 6629469 | 18575.3 |
| chromate transporter | RHPLAN_RS30970 | Not Available | Negative | 6629694 - 6630230 | 18652.3 |
| chromate transporter | RHPLAN_RS30975 | Not Available | Negative | 6630227 - 6630778 | 19982.2 |
| Tmrna,resume consensus sequence (at 198): catagttgccaacgacaa | Not Available | Not Available | Positive | 6630882 - 6631215 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.