Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RHPLAN_RS30835 | Not Available | Negative | 6598724 - 6599740 | 35394.8 |
| abc transporter permease | RHPLAN_RS30840 | Not Available | Negative | 6599819 - 6600607 | 28939.1 |
| ybhb/ybcl family raf kinase inhibitor-like protein | RHPLAN_RS30845 | Not Available | Negative | 6600654 - 6601226 | 19712.4 |
| abc transporter atp-binding protein | RHPLAN_RS30850 | Not Available | Negative | 6601321 - 6602163 | 30106.2 |
| sulfatase-like hydrolase/transferase | RHPLAN_RS30855 | Not Available | Negative | 6602201 - 6603916 | 63775.2 |
| sulfatase-like hydrolase/transferase | RHPLAN_RS30860 | Not Available | Negative | 6603919 - 6605637 | 63938.5 |
| ketol-acid reductoisomerase | RHPLAN_RS30865 | Not Available | Negative | 6605860 - 6606879 | 37262.9 |
| sulfate/molybdate abc transporter atp-binding protein | RHPLAN_RS30870 | Not Available | Negative | 6606998 - 6608050 | 38778.4 |
| sulfate abc transporter permease subunit cysw | RHPLAN_RS30875 | Not Available | Negative | 6608229 - 6609101 | 31342.0 |
| sulfate abc transporter permease subunit cyst | RHPLAN_RS30880 | Not Available | Negative | 6609094 - 6609954 | 30895.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.