Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | RHPLAN_RS30785 | Not Available | Positive | 6589856 - 6590842 | 36303.8 |
| Trna-lys | Not Available | Not Available | Positive | 6590904 - 6590979 | Not Available |
| spy/cpxp family protein refolding chaperone | RHPLAN_RS39890 | Not Available | Negative | 6591202 - 6591765 | 20436.4 |
| 2-isopropylmalate synthase | RHPLAN_RS30800 | Not Available | Negative | 6592026 - 6593609 | 57583.7 |
| llm class flavin-dependent oxidoreductase | RHPLAN_RS30805 | Not Available | Negative | 6594055 - 6595062 | 37405.7 |
| hypothetical protein | RHPLAN_RS30810 | Not Available | Negative | 6595125 - 6595841 | 26542.6 |
| phzf family phenazine biosynthesis protein | RHPLAN_RS30815 | Not Available | Negative | 6595875 - 6596765 | 31405.6 |
| pyridoxal kinase pdxy | RHPLAN_RS30820 | Not Available | Negative | 6596790 - 6597638 | 29724.6 |
| duf1330 domain-containing protein | RHPLAN_RS30825 | Not Available | Negative | 6597755 - 6598063 | 11325.5 |
| hypothetical protein | RHPLAN_RS30830 | Not Available | Negative | 6598194 - 6598565 | 13186.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.