Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helicase-related proteinRHPLAN_RS03070Not AvailableNegative648667 - 651846120333.0
phospholipase d family proteinRHPLAN_RS03075Not AvailableNegative651843 - 65368166818.1
duf6361 family proteinRHPLAN_RS03080Not AvailableNegative653715 - 65489945253.2
tm0106 family recb-like putative nucleaseRHPLAN_RS03085Not AvailablePositive655020 - 658418124513.0
hypothetical proteinRHPLAN_RS38105Not AvailableNegative658466 - 65882813859.2
hypothetical proteinRHPLAN_RS38950Not AvailableNegative659288 - 66034338617.3
anti-phage zorab system protein zoraRHPLAN_RS03095Not AvailablePositive660425 - 66249172374.8
hypothetical proteinRHPLAN_RS03100Not AvailablePositive662520 - 66355137770.9
eh signature domain-containing proteinRHPLAN_RS38110Not AvailablePositive663551 - 66499653291.2
dead/deah box helicaseRHPLAN_RS38115Not AvailablePositive664993 - 667875105516.0

Displaying genes 621 – 630 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.