Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside diphosphate kinase regulator | RHPLAN_RS30690 | Not Available | Negative | 6569052 - 6569528 | 17590.1 |
| pts sugar transporter subunit iia | RHPLAN_RS30695 | Not Available | Negative | 6569904 - 6570407 | 17621.2 |
| hypothetical protein | RHPLAN_RS39885 | Not Available | Negative | 6570421 - 6570645 | 8106.5 |
| monovalent cation/h+ antiporter subunit a | RHPLAN_RS30700 | Not Available | Positive | 6571081 - 6574014 | 105107.0 |
| na+/h+ antiporter subunit c | RHPLAN_RS30705 | Not Available | Positive | 6574014 - 6574358 | 12055.0 |
| monovalent cation/h+ antiporter subunit d | RHPLAN_RS30710 | Not Available | Positive | 6574355 - 6575974 | 56540.1 |
| na+/h+ antiporter subunit e | RHPLAN_RS30715 | Not Available | Positive | 6575971 - 6576459 | 17721.2 |
| k+/h+ antiporter subunit f | RHPLAN_RS30720 | Not Available | Positive | 6576456 - 6576734 | 9924.46 |
| monovalent cation/h(+) antiporter subunit g | RHPLAN_RS30725 | Not Available | Positive | 6576731 - 6577060 | 11600.7 |
| universal stress protein | RHPLAN_RS30730 | Not Available | Negative | 6577074 - 6577934 | 31067.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.