Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-s-isoprenylcysteine o-methyltransferase | RHPLAN_RS30640 | Not Available | Positive | 6559100 - 6559684 | 22790.6 |
| hypothetical protein | RHPLAN_RS30645 | Not Available | Negative | 6559685 - 6560284 | 21145.2 |
| l,d-transpeptidase | RHPLAN_RS30650 | Not Available | Negative | 6560296 - 6560808 | 18166.1 |
| hypothetical protein | RHPLAN_RS30655 | Not Available | Positive | 6560981 - 6561886 | 32407.7 |
| class i sam-dependent methyltransferase | RHPLAN_RS30670 | Not Available | Positive | 6563548 - 6564234 | 25710.8 |
| hypothetical protein | RHPLAN_RS39875 | Not Available | Negative | 6564440 - 6564616 | 6453.66 |
| recombinase family protein | RHPLAN_RS30675 | Not Available | Positive | 6564722 - 6566302 | 59332.9 |
| hypothetical protein | RHPLAN_RS30680 | Not Available | Positive | 6566302 - 6566562 | 9933.26 |
| plasmid partitioning protein repb c-terminal domain-containing protein | RHPLAN_RS30685 | Not Available | Positive | 6566562 - 6567074 | 19528.2 |
| hypothetical protein | RHPLAN_RS39880 | Not Available | Positive | 6567694 - 6567864 | 6047.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.