Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4142 domain-containing protein | RHPLAN_RS30585 | Not Available | Negative | 6546512 - 6547015 | 18006.3 |
| hypothetical protein | RHPLAN_RS30590 | Not Available | Positive | 6547628 - 6548368 | 27967.5 |
| hypothetical protein | RHPLAN_RS30595 | Not Available | Positive | 6548505 - 6548750 | 8800.9 |
| septal ring lytic transglycosylase rlpa family protein | RHPLAN_RS38710 | Not Available | Positive | 6549572 - 6549937 | 12797.7 |
| l,d-transpeptidase | RHPLAN_RS30600 | Not Available | Negative | 6550011 - 6550613 | 21620.5 |
| is5/is1182 family transposase | RHPLAN_RS39870 | Not Available | Positive | 6551714 - 6551909 | 7226.38 |
| acyltransferase family protein | RHPLAN_RS30615 | Not Available | Positive | 6552621 - 6553700 | 39385.9 |
| ydcf family protein | RHPLAN_RS30625 | Not Available | Negative | 6554881 - 6555480 | 22025.6 |
| hypothetical protein | RHPLAN_RS30630 | Not Available | Positive | 6556499 - 6556789 | 10446.4 |
| hypothetical protein | RHPLAN_RS30635 | Not Available | Positive | 6557904 - 6559103 | 44821.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.