Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS30495 | Not Available | Negative | 6527092 - 6527382 | 10435.7 |
| hypothetical protein | RHPLAN_RS30500 | Not Available | Negative | 6527392 - 6527739 | 13049.5 |
| hsp20 family protein | RHPLAN_RS30505 | Not Available | Positive | 6528084 - 6528551 | 17575.7 |
| h-ns family nucleoid-associated regulatory protein | RHPLAN_RS30510 | Not Available | Negative | 6529750 - 6530082 | 12549.4 |
| hypothetical protein | RHPLAN_RS39845 | Not Available | Negative | 6530337 - 6530600 | 9689.94 |
| hypothetical protein | RHPLAN_RS39850 | Not Available | Negative | 6530674 - 6531045 | 13597.3 |
| hypothetical protein | RHPLAN_RS30520 | Not Available | Negative | 6531658 - 6532071 | 15396.4 |
| hypothetical protein | RHPLAN_RS39855 | Not Available | Negative | 6533785 - 6533976 | 7092.67 |
| hypothetical protein | RHPLAN_RS30525 | Not Available | Positive | 6534259 - 6534465 | 8073.05 |
| hypothetical protein | RHPLAN_RS39860 | Not Available | Negative | 6534546 - 6534704 | 5773.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.