Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | RHPLAN_RS30460 | Not Available | Negative | 6517516 - 6518352 | 29942.0 |
| abc transporter substrate-binding protein | RHPLAN_RS30465 | Not Available | Negative | 6518557 - 6519525 | 35489.9 |
| is1182 family transposase | RHPLAN_RS30470 | Not Available | Negative | 6519706 - 6521145 | 53944.0 |
| hypothetical protein | RHPLAN_RS39830 | Not Available | Negative | 6521698 - 6521988 | 11077.3 |
| is5/is1182 family transposase | RHPLAN_RS30475 | Not Available | Positive | 6522651 - 6523214 | 20969.6 |
| transcription elongation factor grea | RHPLAN_RS38700 | Not Available | Negative | 6523684 - 6524178 | 18063.3 |
| chaperonin groel | RHPLAN_RS30485 | Not Available | Negative | 6524488 - 6526113 | 57530.5 |
| co-chaperone groes | RHPLAN_RS30490 | Not Available | Negative | 6526152 - 6526466 | 11177.5 |
| hypothetical protein | RHPLAN_RS39835 | Not Available | Negative | 6526444 - 6526692 | 8642.64 |
| hypothetical protein | RHPLAN_RS39840 | Not Available | Negative | 6526916 - 6527071 | 5567.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.