Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS30405 | Not Available | Negative | 6505013 - 6505759 | 26825.5 |
| hypothetical protein | RHPLAN_RS39825 | Not Available | Negative | 6505775 - 6506749 | 34105.8 |
| atpase domain-containing protein | RHPLAN_RS30420 | Not Available | Positive | 6507323 - 6508825 | 54873.2 |
| response regulator | RHPLAN_RS30425 | Not Available | Positive | 6508822 - 6510519 | 61521.1 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS30430 | Not Available | Negative | 6511093 - 6512064 | 34126.7 |
| lysr family transcriptional regulator | RHPLAN_RS30435 | Not Available | Positive | 6512161 - 6513072 | 33678.1 |
| abc transporter substrate-binding protein | RHPLAN_RS30440 | Not Available | Negative | 6513535 - 6514521 | 35795.5 |
| lysr family transcriptional regulator | RHPLAN_RS30445 | Not Available | Negative | 6514721 - 6515632 | 33678.9 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS30450 | Not Available | Positive | 6515757 - 6516749 | 34985.1 |
| msmeg_1061 family fmn-dependent ppox-type flavoprotein | RHPLAN_RS30455 | Not Available | Positive | 6516768 - 6517394 | 23029.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.