Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS30350 | Not Available | Positive | 6493499 - 6494389 | 32563.7 |
| bifunctional dna primase/polymerase | RHPLAN_RS38690 | Not Available | Positive | 6494415 - 6495170 | 26831.2 |
| hypothetical protein | RHPLAN_RS30360 | Not Available | Positive | 6495163 - 6496794 | 59548.4 |
| hypothetical protein | RHPLAN_RS30365 | Not Available | Positive | 6496988 - 6497365 | 13657.3 |
| duf5681 domain-containing protein | RHPLAN_RS30370 | Not Available | Positive | 6497830 - 6498240 | 15110.1 |
| site-specific dna-methyltransferase | RHPLAN_RS30375 | Not Available | Positive | 6498240 - 6499475 | 45307.2 |
| mbl fold metallo-hydrolase | RHPLAN_RS30380 | Not Available | Negative | 6499725 - 6500774 | 36883.9 |
| lysr family transcriptional regulator | RHPLAN_RS30385 | Not Available | Positive | 6500858 - 6501775 | 33340.5 |
| arylamine n-acetyltransferase | RHPLAN_RS30395 | Not Available | Negative | 6502809 - 6503663 | 32341.7 |
| abc transporter substrate-binding protein | RHPLAN_RS30400 | Not Available | Positive | 6503896 - 6504882 | 35257.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.