Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxaloacetate decarboxylase | RHPLAN_RS30250 | Not Available | Negative | 6468911 - 6469774 | 30545.8 |
| abc transporter atp-binding protein | RHPLAN_RS30255 | Not Available | Negative | 6469845 - 6471923 | 75476.5 |
| abc transporter permease | RHPLAN_RS30260 | Not Available | Negative | 6471926 - 6472768 | 29770.3 |
| abc transporter permease | RHPLAN_RS30265 | Not Available | Negative | 6472765 - 6473682 | 33681.4 |
| gntr family transcriptional regulator | RHPLAN_RS30270 | Not Available | Positive | 6473904 - 6474644 | 27204.6 |
| abc transporter substrate-binding protein | RHPLAN_RS30275 | Not Available | Positive | 6474653 - 6476173 | 55908.7 |
| class i adenylate-forming enzyme family protein | RHPLAN_RS30280 | Not Available | Positive | 6476193 - 6477746 | 56187.7 |
| abc transporter substrate-binding protein | RHPLAN_RS30285 | Not Available | Positive | 6477788 - 6479305 | 55564.6 |
| amidohydrolase family protein | RHPLAN_RS30290 | Not Available | Positive | 6479350 - 6480252 | 34039.9 |
| amidohydrolase family protein | RHPLAN_RS30295 | Not Available | Negative | 6480306 - 6481319 | 37820.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.