Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitronate monooxygenase family protein | RHPLAN_RS30200 | Not Available | Negative | 6457347 - 6458459 | 39448.1 |
| abc transporter permease | RHPLAN_RS30205 | Not Available | Negative | 6458475 - 6459365 | 31157.1 |
| abc transporter permease | RHPLAN_RS30210 | Not Available | Negative | 6459389 - 6460351 | 34306.6 |
| abc transporter substrate-binding protein | RHPLAN_RS30215 | Not Available | Negative | 6460376 - 6461824 | 53459.1 |
| tetr family transcriptional regulator | RHPLAN_RS30220 | Not Available | Negative | 6462048 - 6462719 | 25099.2 |
| abc transporter atp-binding protein | RHPLAN_RS30225 | Not Available | Negative | 6462919 - 6463911 | 36354.2 |
| abc transporter atp-binding protein | RHPLAN_RS30230 | Not Available | Negative | 6463917 - 6464906 | 36579.8 |
| fad-binding oxidoreductase | RHPLAN_RS30235 | Not Available | Negative | 6465182 - 6466732 | 54945.1 |
| isochorismatase family protein | RHPLAN_RS30240 | Not Available | Negative | 6466751 - 6467479 | 26192.4 |
| dihydroorotase family protein | RHPLAN_RS30245 | Not Available | Negative | 6467491 - 6468879 | 49713.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.