Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | RHPLAN_RS30105 | Not Available | Negative | 6438110 - 6438973 | 31244.6 |
| hypothetical protein | RHPLAN_RS40275 | Not Available | Positive | 6438960 - 6439286 | 12316.0 |
| lysr family transcriptional regulator | RHPLAN_RS30110 | Not Available | Positive | 6439398 - 6440306 | 33306.7 |
| acyl-coa dehydrogenase family protein | RHPLAN_RS30115 | Not Available | Positive | 6440415 - 6441581 | 42804.9 |
| abc transporter substrate-binding protein | RHPLAN_RS30120 | Not Available | Positive | 6441672 - 6442655 | 34763.9 |
| abc transporter permease | RHPLAN_RS30125 | Not Available | Positive | 6442686 - 6443567 | 31445.0 |
| abc transporter atp-binding protein | RHPLAN_RS30130 | Not Available | Positive | 6443576 - 6444358 | 28416.6 |
| hypothetical protein | RHPLAN_RS30135 | Not Available | Positive | 6444421 - 6445158 | 26394.9 |
| potd/potf family extracellular solute-binding protein | RHPLAN_RS30140 | Not Available | Negative | 6445173 - 6446075 | 33412.3 |
| enoyl-coa hydratase/isomerase family protein | RHPLAN_RS40655 | Not Available | Negative | 6446009 - 6447073 | 38543.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.