Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | RHPLAN_RS30055 | Not Available | Positive | 6428164 - 6429477 | 46384.3 |
| caib/baif coa-transferase family protein | RHPLAN_RS30060 | Not Available | Positive | 6429477 - 6430667 | 43062.8 |
| short-chain dehydrogenase/reductase | RHPLAN_RS30065 | Not Available | Positive | 6430675 - 6431454 | 26701.9 |
| alpha/beta fold hydrolase | RHPLAN_RS30070 | Not Available | Positive | 6431487 - 6432365 | 32525.7 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS30075 | Not Available | Negative | 6432419 - 6433420 | 34736.7 |
| sdr family oxidoreductase | RHPLAN_RS30080 | Not Available | Negative | 6433499 - 6434365 | 31354.1 |
| rraa family protein | RHPLAN_RS30085 | Not Available | Negative | 6434410 - 6435024 | 21770.2 |
| abc transporter atp-binding protein | RHPLAN_RS30090 | Not Available | Negative | 6435061 - 6436170 | 39934.2 |
| potd/potf family extracellular solute-binding protein | RHPLAN_RS30095 | Not Available | Negative | 6436177 - 6437265 | 40002.2 |
| abc transporter permease | RHPLAN_RS30100 | Not Available | Negative | 6437286 - 6438107 | 29837.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.