Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | RHPLAN_RS30005 | Not Available | Positive | 6416909 - 6417367 | 16661.6 |
| is110 family transposase | RHPLAN_RS30010 | Not Available | Negative | 6417525 - 6418457 | 33722.4 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | RHPLAN_RS30015 | Not Available | Negative | 6418684 - 6420960 | 81471.0 |
| (2fe-2s)-binding protein | RHPLAN_RS30020 | Not Available | Negative | 6420960 - 6421442 | 17307.9 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | RHPLAN_RS30025 | Not Available | Negative | 6421443 - 6423776 | 83754.3 |
| xanthine dehydrogenase family protein subunit m | RHPLAN_RS30030 | Not Available | Negative | 6423773 - 6424627 | 30133.5 |
| hypothetical protein | RHPLAN_RS30035 | Not Available | Negative | 6424788 - 6425852 | 37343.0 |
| hypothetical protein | RHPLAN_RS30040 | Not Available | Positive | 6425982 - 6426218 | 9084.77 |
| cupin domain-containing protein | RHPLAN_RS30045 | Not Available | Negative | 6426238 - 6426639 | 14374.3 |
| cobalamin-independent methionine synthase ii family protein | RHPLAN_RS30050 | Not Available | Negative | 6426676 - 6427869 | 44183.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.