Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RHPLAN_RS29955 | Not Available | Positive | 6406953 - 6407954 | 35656.8 |
| abc transporter atp-binding protein | RHPLAN_RS29960 | Not Available | Positive | 6407942 - 6408757 | 30055.5 |
| abc transporter permease | RHPLAN_RS29965 | Not Available | Positive | 6408744 - 6409535 | 28122.1 |
| abc transporter permease | RHPLAN_RS29970 | Not Available | Positive | 6409532 - 6410308 | 27407.4 |
| alpha/beta fold hydrolase | RHPLAN_RS29975 | Not Available | Positive | 6410411 - 6411271 | 32141.1 |
| sdr family nad(p)-dependent oxidoreductase | RHPLAN_RS29980 | Not Available | Positive | 6411298 - 6412116 | 29041.3 |
| abc transporter substrate-binding protein | RHPLAN_RS29985 | Not Available | Positive | 6412182 - 6413408 | 44365.3 |
| abc transporter permease | RHPLAN_RS29990 | Not Available | Positive | 6413499 - 6415385 | 65936.7 |
| abc transporter atp-binding protein | RHPLAN_RS29995 | Not Available | Positive | 6415382 - 6416149 | 27806.8 |
| abc transporter atp-binding protein | RHPLAN_RS30000 | Not Available | Positive | 6416146 - 6416883 | 26635.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.